Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790587.1_cds_XP_016502411.1_1516
CDS Infomation

[gene=LOC107820583] [db_xref=GeneID:107820583] [protein=coilin-like isoform X5] [protein_id=XP_016502411.1] [location=join(22891..23065,23154..23327,23618..23663,23994..24066,25275..25376,25487..25588,25671..25736,25809..25983,26460..26491,27612..28064,28208..28279,28364..28504,28604..28757,28860..28907,29021..29205)] [gbkey=CDS]
Sequence

ATGAAGCGTTTGGCCATGAATCTTCTGACAGTGAAGATGAGTCTTCTGACAGTGAAGAGA
CTGAAGATAATTCTGAAAAGGAAGAAGAGGCAGAGCCAAAGGAAGATACTTCACACCGGG
AAAATGCTACAATTTCCAAGAAAAGAAAAGCATCAGAAACGCTTCCTTGCTCAAAGAAAA
AGAAACACTGTTCTGATGTTAAGAAGAAGCTTGATGAGCAGACCAAGAAACAACAAGATC
TTACTAGCAAGAAACAGAATAGATCTGATACAAAAAACAAAGATATGGAGAATAATAGAG
GAAATGCTGAGAGTAGTGAGGACAATCCTATTACTCCCAGCACGAAAAATCCTATTTAAA
AGGCAAGAACCCATTTTTCCTTCCATGTTCTGCAGAAATGACGAGGTTCAAAAAAGCAGT
GTGGAGAATATAGAGACAACCCCCAACTCTGATGCAACTAAAAAAAAGGGTCCTAGTAGA
ACTGCCAGGAGAAAAAAGGCTAAAAGGCAATGGTTGCGAGAGATGGCCAAAATTCAGGAG
AAGAACACACTTGTTGAATCAGAAGGACTGCGGAACTGGAAAGAATTGCAAGCTGAAGCT
GGAAGAGGAGAGCCTAGCCGCCAACCAGAGGGGCGAGTGAATGATGAGGCTAATGGCCAA
CCAAAGGGACACCGAAATTGGAAGCAACAGAAAACTAAAGCTAAAAAAGAAGAGGCAACT
GGCCAACCAAAAGGACTATTGCATTGGAAGCAATTTCATGGTGAAGATCAGAATAGAGAT
ACAGACCAAGAAAAGCATGCAGAAGAAACAAGCAAATCGTCTGGAAAATCATGTCAAAAT
ATTGACACAGAAGATGAAGTTGTTCCAGTTGAGATAAGGCCTGGGCATATTCGCTTTGAA
CCTCTGGGAAAAGAACTAGTTTCGAAGCAGAGTCGAGTAGAAGTGGAAAGTTTCAGGTGG
AATGGCATGATGAGCAAGAAAAAGGGTCAGAAATGGGGCCAAGAGAAAGTCTCATTTTCC
CAAAGGAATGATTCTCCTGGTTCAAACAAAGAACGTCCTGGGATGATGAATTGTGAGAGA
CAGAGATGGGGCCAAGAGAAAGTCTCATTTTCCCAAAACAATGATTCTCTTGAGATGATG
AATTGTGAGAGACAGAAATGGGGTCAAGAGAAAGTTTCATTTTCCCACAACGACTCTCTA
GGTTCAAGGAAAGGACATCCTGAGATGATGAATCGTGAAAGACAGAAATGGGGTCAAGAA
AAAGTTTCGTTTCCCCAAAACAATGATTCTCTAGGTTCAAACAAAGAACATCCTGAGATG
TTGAATGGTGAAAAAGAGCCTCATTGTCATGAATCAATTGACTTCAATACACTTCCTTTT
CTTTCTGGTGTGCCCAAGGAAGGTCTTGTGATTGCATACCGGTTGCTAGAGTTATCATCA
ACTTGGACCCCTGAAGTTTCCTCCTATCGGGTTGGGAAAATATCGTGGTGTAATTCTGAA
GCAAATAGAGTTCTACTGATGCCAGTAGCTGAATTTCCAGTCATTTTTAGTGAGGATGAG
TCTTCAAAGCAACCAGATAGCTCTATTTATAATGAAAACGGATCTCTGGAGATAGATTTT
TCAGCACTTCTTGAAGTGCGTCTGCTGAAAAATGGTACTCCAGACTCAGCAGGAGTTCCT
GGTCGGGTTATTGAAGGTTCTGCTGCCAATGGGTCCACTCCAGTGATTGGAAGCAGTAAA
AAGAAAACTGAAACCCCATCTGCTGGAGCTGCAGAAGTAAACAATGGGAAAAAAACACAA
TCTACCCCTTCAGGAAACGGCAGAGTGAACCTGTGGGAGCAATTCAGTGAGACTCTAAAG
GCCAAGAAGACAGAATTATCTCAGGAAGGTAGTTGGGGTAAGCCGAGTTCTGGGAAGAAC
TCGTGGTCATATCGATCCATGAGAGGCGGTGCGCTGGGCCCTACAATGGCCATCCTAAGA
TCCCAAAACAAAATATGA

Peptide Sequence

PEP ID

XP_016502411.1
PEP Infomation

PREDICTED: coilin-like isoform X5 [Nicotiana tabacum]
Sequence

MKRLAMNLLTVKMSLLTVKRLKIILKRKKRQSQRKILHTGKMLQFPRKEKHQKRFLAQRK
RNTVLMLRRSLMSRPRNNKILLARNRIDLIQKTKIWRIIEEMLRVVRTILLLPARKILFK
RQEPIFPSMFCRNDEVQKSSVENIETTPNSDATKKKGPSRTARRKKAKRQWLREMAKIQE
KNTLVESEGLRNWKELQAEAGRGEPSRQPEGRVNDEANGQPKGHRNWKQQKTKAKKEEAT
GQPKGLLHWKQFHGEDQNRDTDQEKHAEETSKSSGKSCQNIDTEDEVVPVEIRPGHIRFE
PLGKELVSKQSRVEVESFRWNGMMSKKKGQKWGQEKVSFSQRNDSPGSNKERPGMMNCER
QRWGQEKVSFSQNNDSLEMMNCERQKWGQEKVSFSHNDSLGSRKGHPEMMNRERQKWGQE
KVSFPQNNDSLGSNKEHPEMLNGEKEPHCHESIDFNTLPFLSGVPKEGLVIAYRLLELSS
TWTPEVSSYRVGKISWCNSEANRVLLMPVAEFPVIFSEDESSKQPDSSIYNENGSLEIDF
SALLEVRLLKNGTPDSAGVPGRVIEGSAANGSTPVIGSSKKKTETPSAGAAEVNNGKKTQ
STPSGNGRVNLWEQFSETLKAKKTELSQEGSWGKPSSGKNSWSYRSMRGGALGPTMAILR
SQNKI

Transcript Sequence

Gene sequence data has not been registered.